Publications
1. Pongprayoon P, Beckstein O, Wee CL, and Sansom MSP*. Simulations of anion transport through OprP reveal the molecular basis for high affinity and selectivity for phosphate, PNAS. 2009, 106:21614-21618.
2. Pongprayoon P, Beckstein O, and Sansom MSP*. Biomimetic design of a brush-like nanopore: Simulation studies, J Phys Chem B, 2012, 116:462-468.
3. Pongprayoon P*. How do the protonation states of E296 and D312 in OmpF and D299 and D315 in homologous OmpC affect protein structure and dynamics? Simulation studies, Comp Bio Chem, 2014, 53:226-234
4. Pongprayoon P and Gleeson MP*. Probing the Binding Site Characteristics of Human Serum Albumin: A Combined Molecular Dynamics and Cheminformatics Investigation, J Mol Graph Model, 2014, 54:164-173
5. Niramitranon J, Sansom MSP, and Pongprayoon P*. Why do the outer membrane proteins OmpF from E.coli and OprP from P.aeruginosa prefer trimers? Simulation studies, J Mol Graph Model, 2016, 10:1-7
6. Awang T, Wiriyatanakorn, N, Saparpakorn P, Japrung D, and Pongprayoon P*, Understanding the effects of two bound glucose in Sudlow site I on structure and function of human serum albumin: Theoretical studies, J Bio Struc Dyn, 2016, 29: 1-10
7. Chayachon A, Luksirikul P, Kankla P. Pongprayoon P, Tarattrakoon, K, Paiboonsukwong K, Fuchareon, S, Dharakul T, and Japrung D*. Graphene based Aptasensor for Glycated Albumin in Diabetes Mellitus Diagnosis and Monitoring, Biosens Bioelectron, 2016, 82:140-145
8. Panman W, Japrung D, and Pongprayoon P*, Exploring the interactions of aptamer with human serum albumin: Simulation studies, J Bio Struc Dyn, 2016, 1-25
9. Chaimanatsakun, A, Japrung, D, and Pongprayoon P*. Multiscale simulation studies of geometry effects on solution transport through nanopores, Mol Sim, 2017.
10. Soomboon, K, Niramitranon J, and Pongprayoon P*. Probing the binding affinities of imipenem and ertapenem for outer membrane carboxylate channel D1 (OccD1) from P. aeruginosa: simulation studies. J Mol Mod, 2017.
11. Pongprayoon, P* and Mori, T*. Critical role of dimer formation in monosaccharide binding to human serum albumin. PCCP, 2018.
12. Awang, T and Pongprayoon, P*. The Adsorption of human defensin 5 on bacterial membranes: simulation studies. JMMO, 2018.
13. Baichareon, A, Vijayan, R, and Pongprayoon, P*. Structural insights into betaine aldehyde dehydrogenase (BADH2) from Oryza sativa explored by modeling and simulations. Sci Rep, 2018.
14. Pongprayoon, P and Chaimanatsakun, A*. Revealing the effects of pore size and geometry on the mechanical properties of graphene nanopore using atomic finite element method. Acta Mech Solid Sinica, 2018.